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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931549.1_cds_XP_016478336.1_69983
CDS Infomation

[gene=LOC107799710] [db_xref=GeneID:107799710] [protein=squalene synthase-like] [protein_id=XP_016478336.1] [location=join(21082..21252,26696..26698,35660..35702,35850..35939,36584..36659,36811..36880,37439..37582,37660..37764,37898..38044,38342..38418,38590..38638,39184..39189)] [gbkey=CDS]
Sequence

ATGAGGCATCCAGATGAAGTATACCTATTGATGAAGCTCATGCTAGCTGCAAAACTCATC
GAGAAGGGGACACCATTGCAGCCACACTGGGCCTTCTGCAATACTACTCTCCGCAAGGTC
TCTCGCAGCTTTGCTCTCCTCATTCAACAGCTGCCTACCGACCTTCGCAACGCAGTTTGT
GTTTACTATTTGGTTCTACGAGCACTTGACACTGTTGAGGATGATACCAGCTTAGCTACT
GAGGTTAGAGTACCTATCCTGAGAAATGTTTACTGCCACTTCTATGATCGTGAATGGCAT
TTTTCATGTGGTACAAAGGCCTTCAAGGTTCTCATGGACCAATTCCATGATGTTTCCACT
GCTTTCCTGGAGCTTGATAAAAATTATCAGGAGGTGATTAAGGATATTACCAAGAGGATG
GGTGAAGGGATGGCAAAATTTCTATGCAAGGAGGTAGAAACACTCGATGATTATAATGAA
TATTGTCATTATGCAGCTGGACTTTGTGGATTAGGCTTGTCAAATCTTTTTTATGCTTCT
GGAAGAGAAGATTTAGCACCAGAATCCCTCTCCATTTCTATGGGTTTATTTCTTCAGAAA
ATAAGCATTATTAGAGATTATCTAGAGGACATAAATGAAGTACCCAAGTGTCGTATTTTC
TGGCCCTGTCAAATTTGGAGTAAATATGTTAACAAACTTGAGGACTTTAAGTATGAGGAA
AACTCAGTCAAGGCAGTACAATGTCTGAATGAAATGGTCACTAATGCTTTATTACATGCA
GAGGATTGTCTGACTTACATGTCTAATTTACGAGATCCTGCTATCTTTCACTTCTGTGCA
ATTCCCCAGATCATAAATATGGAGAACTTGGCGATGTACTACAACAACATTGAAGTTTTC
AAAGGCGTTGTAGAAATGAGACAGAGGAAATCTTACATATTCAGCTGTCAGCCTAATTGT
TATATTCAACTTCTGGTTTGA

Peptide Sequence

PEP ID

XP_016478336.1
PEP Infomation

PREDICTED: squalene synthase-like [Nicotiana tabacum]
Sequence

MRHPDEVYLLMKLMLAAKLIEKGTPLQPHWAFCNTTLRKVSRSFALLIQQLPTDLRNAVC
VYYLVLRALDTVEDDTSLATEVRVPILRNVYCHFYDREWHFSCGTKAFKVLMDQFHDVST
AFLELDKNYQEVIKDITKRMGEGMAKFLCKEVETLDDYNEYCHYAAGLCGLGLSNLFYAS
GREDLAPESLSISMGLFLQKISIIRDYLEDINEVPKCRIFWPCQIWSKYVNKLEDFKYEE
NSVKAVQCLNEMVTNALLHAEDCLTYMSNLRDPAIFHFCAIPQIINMENLAMYYNNIEVF
KGVVEMRQRKSYIFSCQPNCYIQLLV

Transcript Sequence

Gene sequence data has not been registered.